GENE ID: ENSG00000196233

Symbol Location Gene Type Genome Version Species
LCOR chr10:96832254~96995956(+) protein_coding Homo_sapiens.GRCh38.p13 Homo sapiens


RNA

No. RNA ID RNA Name Location RNA Type
1. ENST00000676067.1 LCOR-222 chr10:96832254~96958886(+) nonsense_mediated_decay
2. ENST00000676187.1 LCOR-224 chr10:96832260~96958865(+) protein_coding
3. ENST00000676257.1 LCOR-225 chr10:96832260~96958867(+) nonsense_mediated_decay
4. ENST00000675687.1 LCOR-218 chr10:96832264~96956005(+) protein_coding
5. ENST00000675151.1 LCOR-213 chr10:96832264~96958850(+) nonsense_mediated_decay
6. ENST00000675251.1 LCOR-215 chr10:96832272~96950232(+) nonsense_mediated_decay
7. ENST00000676123.1 LCOR-223 chr10:96832281~96958889(+) protein_coding
8. ENST00000675471.1 LCOR-216 chr10:96832282~96958850(+) protein_coding
9. ENST00000371103.8 LCOR-203 chr10:96832282~96964441(+) protein_coding
10. ENST00000421806.4 LCOR-204 chr10:96832298~96995956(+) protein_coding
11. ENST00000675250.1 LCOR-214 chr10:96832303~96833452(+) protein_coding
12. ENST00000675902.1 LCOR-219 chr10:96832315~96944315(+) nonsense_mediated_decay
13. ENST00000540664.6 LCOR-208 chr10:96832319~96958926(+) protein_coding
14. ENST00000676414.1 LCOR-229 chr10:96832319~96958926(+) protein_coding
15. ENST00000675537.1 LCOR-217 chr10:96832906~96958877(+) protein_coding
16. ENST00000675117.1 LCOR-211 chr10:96832936~96982041(+) protein_coding
17. ENST00000675125.1 LCOR-212 chr10:96832949~96958877(+) nonsense_mediated_decay
18. ENST00000356016.7 LCOR-201 chr10:96832955~96958891(+) protein_coding
19. ENST00000371097.8 LCOR-202 chr10:96832980~96958926(+) protein_coding
20. ENST00000676381.1 LCOR-228 chr10:96833025~96958884(+) protein_coding
21. ENST00000674796.1 LCOR-210 chr10:96833030~96958866(+) nonsense_mediated_decay
22. ENST00000675971.1 LCOR-221 chr10:96833032~96958865(+) protein_coding
23. ENST00000674725.1 LCOR-209 chr10:96833032~96964441(+) protein_coding
24. ENST00000676373.1 LCOR-227 chr10:96833042~96949655(+) retained_intron
25. ENST00000676314.1 LCOR-226 chr10:96833406~96907330(+) nonsense_mediated_decay
26. ENST00000675915.1 LCOR-220 chr10:96833406~96907330(+) nonsense_mediated_decay
27. ENST00000493486.1 LCOR-207 chr10:96907285~96949126(+) processed_transcript
28. ENST00000469510.1 LCOR-206 chr10:96907286~96908090(+) retained_intron
29. ENST00000463415.1 LCOR-205 chr10:96949223~96958515(+) processed_transcript


Statistics of ASE




Details of SAS

No. ASE ID ASE Type Detection Position Differential Tissue Relevant Transcripts
1. chr10@+@96907747^96944112-@96907747^96944101- A3SS adipose_tissue, airway_epithelium, anterior_insula, bone_marrow, caudate, cornea, dorsolateral_prefrontal_cortex, kidney, left_atrium, left_ventricle, liver, lung, nucleus_accumbens, orbitofrontal, putamen, subiculum right_ventricle ENST00000676067.1, ENST00000676187.1, ENST00000676257.1, ENST00000675687.1, ENST00000675151.1, ENST00000675251.1, ENST00000676123.1, ENST00000675471.1, ENST00000371103.8, ENST00000421806.4, ENST00000540664.6, ENST00000676414.1, ENST00000675537.1, ENST00000675117.1, ENST00000675125.1, ENST00000356016.7, ENST00000371097.8, ENST00000676381.1, ENST00000675971.1, ENST00000674725.1, ENST00000676373.1
2. chr10@+@96949295^96952102-@96949294^96949296-96952102^96952104- RI adipose_tissue, airway_epithelium, anterior_insula, bone_marrow, caudate, cornea, dorsolateral_prefrontal_cortex, kidney, left_atrium, left_ventricle, liver, lung, nucleus_accumbens, orbitofrontal, pancreas, putamen, right_atrium, subiculum, trapezium_articular_cartilage, right_ventricle, skin kidney ENST00000676067.1, ENST00000676187.1, ENST00000676257.1, ENST00000675687.1, ENST00000675151.1, ENST00000676123.1, ENST00000675471.1, ENST00000371103.8, ENST00000421806.4, ENST00000540664.6, ENST00000676414.1, ENST00000675537.1, ENST00000675117.1, ENST00000675125.1, ENST00000356016.7, ENST00000371097.8, ENST00000676381.1, ENST00000674796.1, ENST00000675971.1, ENST00000674725.1, ENST00000463415.1
3. chr10@+@96832399^96907264-@96832399^96833405-96833479^96907264- SE adipose_tissue, airway_epithelium, anterior_insula, bone_marrow, caudate, cornea, dorsolateral_prefrontal_cortex, kidney, left_atrium, left_ventricle, liver, lung, nucleus_accumbens, orbitofrontal, putamen, right_atrium, subiculum, trapezium_articular_cartilage, right_ventricle, skin orbitofrontal ENST00000676067.1, ENST00000676187.1, ENST00000675687.1, ENST00000675151.1, ENST00000675251.1, ENST00000676123.1, ENST00000675471.1, ENST00000371103.8, ENST00000421806.4, ENST00000675902.1, ENST00000540664.6, ENST00000676414.1, ENST00000675537.1, ENST00000356016.7, ENST00000371097.8, ENST00000674725.1, ENST00000676373.1, ENST00000676314.1, ENST00000675915.1
4. chr10@+@96907747^96949007-@96907747^96944101-96944245^96949007- SE adipose_tissue, airway_epithelium, anterior_insula, bone_marrow, caudate, cornea, dorsolateral_prefrontal_cortex, kidney, left_atrium, left_ventricle, liver, lung, nucleus_accumbens, orbitofrontal, pancreas, putamen, subiculum, trapezium_articular_cartilage, right_ventricle, skin dorsolateral_prefrontal_cortex, liver ENST00000676067.1, ENST00000676187.1, ENST00000676257.1, ENST00000675687.1, ENST00000675151.1, ENST00000675251.1, ENST00000676123.1, ENST00000675471.1, ENST00000371103.8, ENST00000421806.4, ENST00000540664.6, ENST00000676414.1, ENST00000675537.1, ENST00000675117.1, ENST00000675125.1, ENST00000356016.7, ENST00000371097.8, ENST00000676381.1, ENST00000674796.1, ENST00000675971.1, ENST00000674725.1, ENST00000676373.1, ENST00000493486.1
5. chr10@+@96907747^96949007-@96907747^96944112-96944245^96949007- SE adipose_tissue, airway_epithelium, anterior_insula, bone_marrow, caudate, cornea, dorsolateral_prefrontal_cortex, kidney, left_atrium, left_ventricle, liver, lung, nucleus_accumbens, orbitofrontal, pancreas, putamen, subiculum, trapezium_articular_cartilage, right_ventricle, skin dorsolateral_prefrontal_cortex ENST00000676067.1, ENST00000676187.1, ENST00000676257.1, ENST00000675687.1, ENST00000675151.1, ENST00000675251.1, ENST00000676123.1, ENST00000675471.1, ENST00000371103.8, ENST00000421806.4, ENST00000540664.6, ENST00000676414.1, ENST00000675537.1, ENST00000675117.1, ENST00000675125.1, ENST00000356016.7, ENST00000371097.8, ENST00000676381.1, ENST00000674796.1, ENST00000675971.1, ENST00000674725.1, ENST00000676373.1, ENST00000493486.1
6. chr10@+@96952196^96958411-@96952196^96954952-96955454^96958411- SE adipose_tissue, airway_epithelium, bone_marrow, caudate, kidney, left_atrium, liver, lung, nucleus_accumbens, pancreas, putamen, subiculum, trapezium_articular_cartilage, right_ventricle, skin lung ENST00000540664.6, ENST00000676414.1, ENST00000675537.1, ENST00000676381.1, ENST00000463415.1
7. chr10@+@96952196^96958411-@96952196^96954952-96955671^96958411- SE adipose_tissue, airway_epithelium, bone_marrow, caudate, kidney, left_atrium, liver, lung, nucleus_accumbens, pancreas, putamen, subiculum, trapezium_articular_cartilage, right_ventricle, skin lung ENST00000540664.6, ENST00000676414.1, ENST00000675537.1, ENST00000676381.1, ENST00000463415.1
8. chr10@+@96952196^96958411-@96952196^96954952-96955957^96958411- SE adipose_tissue, airway_epithelium, bone_marrow, caudate, kidney, left_atrium, liver, lung, nucleus_accumbens, pancreas, putamen, subiculum, trapezium_articular_cartilage, right_ventricle, skin lung ENST00000540664.6, ENST00000676414.1, ENST00000675537.1, ENST00000676381.1, ENST00000463415.1
12. chr10@+@96833118^96833405-96833479^96907667-@96833118^96907264-96907330^96907667- MXE adipose_tissue, dorsolateral_prefrontal_cortex, lung, orbitofrontal, putamen, subiculum orbitofrontal novelJunction
63. chr10@+@96832399^96907264-@96832399^96833405-96833477^96907264- SE caudate, putamen putamen novelSpliceSite
78. chr10@+@96952196^96958411-@96952196^96954952-96955428^96958411- SE lung, trapezium_articular_cartilage lung novelSpliceSite