GENE ID: ENSG00000139613

Symbol Location Gene Type Genome Version Species
SMARCC2 chr12:56162359~56189567(-) protein_coding Homo_sapiens.GRCh38.p13 Homo sapiens


RNA

No. RNA ID RNA Name Location RNA Type
1. ENST00000550164.6 SMARCC2-209 chr12:56162359~56189483(-) protein_coding
2. ENST00000394023.7 SMARCC2-203 chr12:56162983~56189567(-) protein_coding
3. ENST00000347471.8 SMARCC2-202 chr12:56163330~56189548(-) protein_coding
4. ENST00000552674.5 SMARCC2-214 chr12:56163345~56189473(-) nonsense_mediated_decay
5. ENST00000267064.8 SMARCC2-201 chr12:56163345~56189548(-) protein_coding
6. ENST00000549209.5 SMARCC2-206 chr12:56171394~56174713(-) processed_transcript
7. ENST00000548130.5 SMARCC2-205 chr12:56171877~56181126(-) retained_intron
8. ENST00000552931.1 SMARCC2-215 chr12:56172239~56174732(-) retained_intron
9. ENST00000552566.1 SMARCC2-212 chr12:56174531~56178631(-) retained_intron
10. ENST00000549757.5 SMARCC2-207 chr12:56178819~56184248(-) retained_intron
11. ENST00000550859.5 SMARCC2-211 chr12:56181748~56189391(-) processed_transcript
12. ENST00000550519.5 SMARCC2-210 chr12:56181748~56189543(-) nonsense_mediated_decay
13. ENST00000550150.1 SMARCC2-208 chr12:56183324~56189483(-) retained_intron
14. ENST00000552627.1 SMARCC2-213 chr12:56183879~56185223(-) retained_intron
15. ENST00000547356.1 SMARCC2-204 chr12:56185790~56189520(-) retained_intron


Statistics of ASE




Details of SAS

No. ASE ID ASE Type Detection Position Differential Tissue Relevant Transcripts
1. chr12@-@56178809^56178534-@56178811^56178809-56178535^56178533- RI adipose_tissue, airway_epithelium, anterior_insula, bone_marrow, caudate, cornea, dorsolateral_prefrontal_cortex, kidney, left_atrium, left_ventricle, liver, lung, nucleus_accumbens, orbitofrontal, pancreas, putamen, right_atrium, subiculum, trapezium_articular_cartilage, right_ventricle, skin caudate ENST00000550164.6, ENST00000394023.7, ENST00000347471.8, ENST00000552674.5, ENST00000267064.8, ENST00000548130.5
2. chr12@-@56181481^56181101-@56181483^56181481-56181102^56181100- RI adipose_tissue, airway_epithelium, anterior_insula, bone_marrow, caudate, cornea, dorsolateral_prefrontal_cortex, kidney, left_atrium, left_ventricle, liver, lung, nucleus_accumbens, orbitofrontal, pancreas, putamen, right_atrium, subiculum, trapezium_articular_cartilage, right_ventricle, skin kidney, putamen ENST00000550164.6, ENST00000394023.7, ENST00000347471.8, ENST00000552674.5, ENST00000267064.8, ENST00000549757.5
3. chr12@-@56173695^56172704-@56173695^56173029-56172936^56172704- SE adipose_tissue, airway_epithelium, anterior_insula, bone_marrow, caudate, cornea, dorsolateral_prefrontal_cortex, kidney, left_atrium, left_ventricle, liver, lung, nucleus_accumbens, orbitofrontal, pancreas, putamen, right_atrium, subiculum, trapezium_articular_cartilage, right_ventricle, skin adipose_tissue ENST00000550164.6, ENST00000394023.7, ENST00000347471.8, ENST00000552674.5, ENST00000267064.8, ENST00000549209.5, ENST00000548130.5, ENST00000552931.1
4. chr12@-@56184174^56182079-@56184174^56183930-56183860^56182079- SE adipose_tissue, airway_epithelium, anterior_insula, bone_marrow, caudate, cornea, dorsolateral_prefrontal_cortex, kidney, left_atrium, left_ventricle, liver, lung, nucleus_accumbens, orbitofrontal, pancreas, putamen, right_atrium, subiculum, trapezium_articular_cartilage, right_ventricle, skin pancreas ENST00000550164.6, ENST00000394023.7, ENST00000347471.8, ENST00000552674.5, ENST00000267064.8, ENST00000549757.5, ENST00000550859.5, ENST00000550519.5
33. chr12@-@56173695^56172704-@56173695^56173158-56172936^56172704- SE adipose_tissue, anterior_insula adipose_tissue novelSpliceSite
34. chr12@-@56184174^56182079-@56184174^56183928-56183860^56182079- SE adipose_tissue, airway_epithelium, anterior_insula, caudate, cornea, dorsolateral_prefrontal_cortex, kidney, left_atrium, left_ventricle, liver, lung, nucleus_accumbens, orbitofrontal, pancreas, putamen, right_atrium, subiculum, trapezium_articular_cartilage, right_ventricle, skin adipose_tissue novelSpliceSite